BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B09SP1|AL427120
(1019 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1253 1992 0.0
>3x_Contig1253
Length = 5628
Score = 1992 bits (1003), Expect = 0.0
Identities = 1013/1017 (99%), Gaps = 1/1017 (0%)
Strand = Plus / Minus
Query: 4 catcaatttgttcaaaataaacttcaaaaatcacataacgaaccgcgaaatacaatgtat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 catcaatttgttcaaaataaacttcaaaaatcacataacgaaccgcgaaatacaatgtat 1073
Query: 64 cgaaaatctacgacatttcacgtttaaagaagcaaaagaatatggcacttctttatcgta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 cgaaaatctacgacatttcacgtttaaagaagcaaaagaatatggcacttctttatcgta 1013
Query: 124 cactaatgatgattcaaaaccttggataattactgtaactaaccatggtcgtattgttat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 cactaatgatgattcaaaaccttggataattactgtaactaaccatggtcgtattgttat 953
Query: 184 gttagatatcagagacatgtcagtcgtccatcaaatcgtaatatcgcccgtgtatggttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 gttagatatcagagacatgtcagtcgtccatcaaatcgtaatatcgcccgtgtatggttc 893
Query: 244 agtttcaacttcgtctgtkagttctgacggtcattggctactatgtggaacaacacacgg 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 agtttcaacttcgtctgttagttctgacggtcattggctactatgtggaacaacacacgg 833
Query: 304 agcattacttctttggaatctcacatttaaaattttggtgaaatcttggtgttttggaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 agcattacttctttggaatctcacatttaaaattttggtgaaatcttggtgttttggaga 773
Query: 364 tgaaagtcctattcgcaaggtcattcttttccaaaaggatagcagaaagaacgaatatag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tgaaagtcctattcgcaaggtcattcttttccaaaaggatagcagaaagaacgaatatag 713
Query: 424 cgctatagtgaccggtggaagttctaaatgtttattcacaatatggaatttgacaagact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cgctatagtgaccggtggaagttctaaatgtttattcacaatatggaatttgacaagact 653
Query: 484 tcaagtggaggaagtagtttcttcatctaacatggacacatcaattgattacttggtacc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tcaagtggaggaagtagtttcttcatctaacatggacacatcaattgattacttggtacc 593
Query: 544 gaaaccatttaaaaggggcacgaaactcaatcaaacggcaatactcaagaatgactacgt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaaaccatttaaaaggggcacgaaactcaatcaaacggcaatactcaagaatgactacgt 533
Query: 604 atgcgaatacatttacaggcaaggtaatgtttatbatgctgatggattaacgtctgaaat 663
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 532 atgcgaatacatttacaggcaaggtaatgtttattatgctgatggattaacgtctgaaat 473
Query: 664 ttataggtacaatatcagaaacagatccaacgtttcacttttatcaacaaaaagcgattc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttataggtacaatatcagaaacagatccaacgtttcacttttatcaacaaaaagcgattc 413
Query: 724 cgacaaatcaaatgcaactaagctaactctgaattgctggcttacaactgttggaaaaac 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cgacaaatcaaatgcaactaagctaactctgaattgctggcttacaactgttggaaaaac 353
Query: 784 ttgggatcataacattcaggaccgtgtaacatattatcatacagatttgatcaattgcat 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttgggatcataacattcaggaccgtgtaacatattatcatacagatttgatcaattgcat 293
Query: 844 gacttttggctgtttacagtctgcagctgcacttgtttcagcagacaattcgggtatgat 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gacttttggctgtttacagtctgcagctgcacttgtttcagcagacaattcgggtatgat 233
Query: 904 acatttgtatatgcttcaaaagtagtcgattaaccaaattacactatctcagttctttat 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 acatttgtatatgcttcaaaagtagtcgattaaccaaattacactatctcagttctttat 173
Query: 964 agaatatgagaacatgagtwtcttcgtattcactgaagctg-cagttttatgattgt 1019
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 172 agaatatgagaacatgagtatcttcgtattcactgaagctgccagttttatgattgt 116
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8155
Number of Sequences: 1807
Number of extensions: 8155
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 1019
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1003
effective length of database: 10,329,639
effective search space: 10360627917
effective search space used: 10360627917
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)